Package | Description |
---|---|
de.unibi.techfak.scie.annotators.abbreviation | |
de.unibi.techfak.scie.ontology | |
de.unibi.techfak.scie.ontology.driver | |
de.unibi.techfak.scie.ontology.importer.ncbi |
Modifier and Type | Field and Description |
---|---|
NodeName |
RefInfo.name |
Constructor and Description |
---|
RefInfo(NodeName name,
NodeHandle handle) |
Modifier and Type | Method and Description |
---|---|
NodeName |
DictionaryMatch.getNameDescr()
Returns the reference to the NodeName this match refers to.
|
Constructor and Description |
---|
DictionaryMatch(NodeHandle node,
NodeName name) |
DictionaryMatch(NodeHandle node,
NodeName name,
int begin,
int end,
double probability)
Creates a new instance of DictionaryMatch.
|
DictionaryMatch(NodeHandle node,
NodeName name,
int begin,
int end,
double probability,
LineSegment partialMatch)
Creates a new instance of DictionaryMatch.
|
Node(OntologyDatabase db,
NodeHandle handle,
NodeName name)
Constructor of the Node class.
|
Node(OntologyDatabase db,
NodeHandle handle,
NodeName name,
boolean root)
Constructor of the Node class.
|
Node(OntologyDatabase db,
OntologyHandle handle,
int id,
NodeName name)
Constructor of the Node class.
|
Node(OntologyDatabase db,
OntologyHandle handle,
int id,
NodeName name,
boolean root)
Constructor of the Node class.
|
Constructor and Description |
---|
Node(OntologyDatabase db,
NodeHandle handle,
Collection<NodeName> names)
Constructor of the Node class.
|
Node(OntologyDatabase db,
NodeHandle handle,
Collection<NodeName> names,
boolean root)
Constructor of the Node class.
|
Node(OntologyDatabase db,
OntologyHandle handle,
int id,
Collection<NodeName> names)
Constructor of the Node class.
|
Node(OntologyDatabase db,
OntologyHandle handle,
int id,
Collection<NodeName> names,
boolean root)
Constructor of the Node class.
|
Modifier and Type | Field and Description |
---|---|
protected List<NodeName> |
NodeDescriptor.names
The list of names attached to the node.
|
Modifier and Type | Method and Description |
---|---|
NodeName |
NodeDescriptor.getPrimaryNameDescr()
Returns the NodeName instance of the primary node name.
|
Modifier and Type | Method and Description |
---|---|
Collection<NodeName> |
NodeDescriptor.getNames()
Returns the names of the described node.
|
Constructor and Description |
---|
NodeDescriptor(NodeHandle handle,
NodeName name)
Constructor of the NodeDescriptor class.
|
NodeDescriptor(NodeHandle handle,
NodeName name,
boolean root)
Constructor of the NodeDescriptor class.
|
NodeDescriptor(OntologyHandle handle,
int id,
NodeName name)
Constructor of the NodeDescriptor class.
|
NodeDescriptor(OntologyHandle handle,
int id,
NodeName name,
boolean root)
Constructor of the NodeDescriptor class.
|
Constructor and Description |
---|
NodeDescriptor(NodeHandle handle,
Collection<NodeName> names)
Constructor of the NodeDescriptor class.
|
NodeDescriptor(NodeHandle handle,
Collection<NodeName> names,
boolean root)
Constructor of the NodeDescriptor class.
|
NodeDescriptor(OntologyHandle handle,
int id,
Collection<NodeName> names)
Constructor of the NodeDescriptor class.
|
NodeDescriptor(OntologyHandle handle,
int id,
Collection<NodeName> names,
boolean root)
Constructor of the NodeDescriptor class.
|
Modifier and Type | Method and Description |
---|---|
static Collection<NodeName> |
NCBIImporter.cleanNodeNames(Collection<NodeName> names) |
Modifier and Type | Method and Description |
---|---|
static Collection<NodeName> |
NCBIImporter.cleanNodeNames(Collection<NodeName> names) |
Copyright (C) 2013, 2014 Raphael Dickfelder, Jan Göpfert, Benjamin Paassen, Andreas Stöckel, licensed under the AGPL v. 3: http://openresearch.cit-ec.de/projects/scie